STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000026711Tubulin alpha-3 chain. (449 aa)    
Predicted Functional Partners:
ENSCCNP00000032423
Serine/threonine-protein kinase DCLK1-like.
   
 
 0.987
Cdc42
Cell division control protein 42 homolog.
   
 0.931
Tjp1
Tight junction protein ZO-1 isoform X1.
    
 0.904
Gja1
Gap junction alpha-1 protein.
   
 
  0.901
Marveld2
MARVEL domain-containing protein 2.
     
  0.900
Tubb3
Tubulin beta-3 chain.
  
0.872
Tubb1
Tubulin beta-1 chain.
  
0.870
Tubb6
Tubulin beta-6 chain.
  
0.868
Tubb4b
Tubulin beta-4B chain.
  
0.867
Tubb2b
Tubulin beta-2B chain.
  
0.867
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.