STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clec4fC-type lectin domain family 4, member f. (548 aa)    
Predicted Functional Partners:
Cd5l
CD5 antigen-like.
   
 0.664
Oit3
Oncoprotein-induced transcript 3 protein.
   
 0.498
Bmp10
Bone morphogenetic protein 10.
   
  
 0.473
Cdh5
Cadherin 5, type 2, VE-cadherin.
   
 0.446
Mrc1
Macrophage mannose receptor 1.
   
 
0.412
ENSCCNP00000005445
annotation not available
   
  
 0.410
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.