STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ryr2LOW QUALITY PROTEIN: ryanodine receptor 2. (1005 aa)    
Predicted Functional Partners:
Calml5
Calmodulin-like protein 5.
    
 0.947
Calml3
Calmodulin-like protein 3.
    
 0.947
Calm3
Calmodulin.
    
 0.947
Prkaca
CAMP-dependent protein kinase catalytic subunit alpha.
    
 0.945
Calml4
Calmodulin-like protein 4.
    
 0.944
Casq2
Calsequestrin 2.
   
 0.933
Casq1
Calsequestrin 1.
   
 0.933
Camk2d
Calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1.
    
 0.908
Camk2b
Calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1.
    
 0.908
Camk2a
Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1.
    
 0.908
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.