STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000027110annotation not available (172 aa)    
Predicted Functional Partners:
Fancm
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
    
 0.801
Lin9
Protein lin-9 homolog isoform X1.
    
 0.425
Rpa1
Replication protein A 70 kDa DNA-binding subunit.
    
 0.416
B2m
Beta-2-microglobulin.
   
 0.407
Rpa2
LOW QUALITY PROTEIN: replication protein A 32 kDa subunit.
   
 0.407
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.