STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dus4lTRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like. (323 aa)    
Predicted Functional Partners:
Bcap31
B-cell receptor-associated protein 31.
 
    
 0.777
Eprs
LOW QUALITY PROTEIN: bifunctional glutamate/proline--tRNA ligase.
  
 
 0.768
Tsr3
Ribosome biogenesis protein TSR3 homolog.
   
  
 0.633
Trmt61a
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
  
 0.607
Trmt11
TRNA (guanine(10)-N2)-methyltransferase homolog.
   
  
 0.600
Gpr22
Probable G-protein coupled receptor 22.
      
 0.563
Mcf2l
Guanine nucleotide exchange factor DBS isoform X1.
      
 0.549
Dtwd1
DTW domain-containing protein 1.
      
 0.547
Mettl1
TRNA (guanine-N(7)-)-methyltransferase isoform X1.
  
 
 0.547
Mettl5
Methyltransferase-like protein 5 isoform X1.
 
      0.544
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.