STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgals4Lectin, galactose binding, soluble 4. (320 aa)    
Predicted Functional Partners:
Tbp
Transcription initiation factor TFIID TATA-box-binding protein.
      
 0.623
Elavl4
ELAV-like protein 4 isoform X1.
      
 0.570
Hpd
4-hydroxyphenylpyruvate dioxygenase.
      
 0.547
Gtf2b
Transcription initiation factor TFIIB.
      
 0.541
Phgdh
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase.
      
 0.513
ENSCCNP00000001861
annotation not available
    
 0.508
Vsig1
V-set and immunoglobulin domain containing 1.
      
 0.468
Galm
LOW QUALITY PROTEIN: aldose 1-epimerase.
      
 0.447
Paics
Phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthase.
      
 0.420
Lgals3
LOW QUALITY PROTEIN: galectin-3.
   
  
0.410
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.