STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp236Zinc finger protein 236. (1753 aa)    
Predicted Functional Partners:
Mamld1
Mastermind-like domain-containing protein 1.
   
 0.673
Ercc6
LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6.
   
  0.617
Tfb2m
Dimethyladenosine transferase 2, mitochondrial isoform X1.
    
 
 0.613
Capn15
Calpain-15 isoform X1.
   
 0.604
Foxp2
Forkhead box protein P2-like.
    
 0.590
Car8
Carbonic anhydrase-related protein isoform X1.
      
 0.573
Znf407
Zinc finger protein 407.
 
 
  
0.569
Med8
Mediator of RNA polymerase II transcription subunit 8 isoform X1.
      
 0.519
ENSCCNP00000019953
annotation not available
    
 0.492
ENSCCNP00000009142
annotation not available
    
 0.424
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.