STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000027540LOW QUALITY PROTEIN: otogelin-like. (726 aa)    
Predicted Functional Partners:
Strc
LOW QUALITY PROTEIN: stereocilin.
    
 0.719
ENSCCNP00000006766
annotation not available
   
  0.691
Fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
  0.691
ENSCCNP00000026563
annotation not available
   
  0.691
ENSCCNP00000033281
annotation not available
    
 0.667
ENSCCNP00000022413
annotation not available
 
 
0.622
F5
Coagulation factor V (labile factor).
    
 0.615
Gle1
LOW QUALITY PROTEIN: nucleoporin GLE1.
   
 0.615
Kcnq4
Potassium voltage-gated channel subfamily KQT member 4 isoform X1.
   
 
 0.590
Myo6
Unconventional myosin-VI isoform X1.
    
 
 0.550
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.