STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000027632Synaptotagmin-like 1. (562 aa)    
Predicted Functional Partners:
Rab27a
Ras-related protein Rab-27A.
   
 
 0.879
Rab27b
Ras-related protein Rab-27B.
   
 
 0.719
Tbc1d10a
TBC1 domain family member 10A.
     
 0.665
Tbc1d10b
TBC1 domain family member 10B.
     
 0.581
Ccdc60
Coiled-coil domain-containing protein 60.
      
 0.575
ENSCCNP00000010977
annotation not available
     
 0.571
ENSCCNP00000019524
Intersectin-2-like isoform X1.
     
 0.571
Itsn2
Intersectin 2.
     
 0.571
Myrip
Rab effector MyRIP.
      
 0.567
Eps8l2
Epidermal growth factor receptor kinase substrate 8-like protein 2.
      
 0.539
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.