STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000027643Transcription elongation factor, mitochondrial-like isoform X1. (357 aa)    
Predicted Functional Partners:
Polrmt
LOW QUALITY PROTEIN: DNA-directed RNA polymerase, mitochondrial.
    
 
 0.926
Utp6
U3 small nucleolar RNA-associated protein 6 homolog.
 
    
 0.599
Crlf3
Cytokine receptor-like factor 3 isoform X1.
      
 0.565
Tfb2m
Dimethyladenosine transferase 2, mitochondrial isoform X1.
   
  
 0.523
Coprs
Coordinator of PRMT5 and differentiation stimulator isoform X1.
      
 0.457
Nf1
Neurofibromin 1.
      
 0.428
Mterf3
Transcription termination factor 3, mitochondrial isoform X1.
   
  
 0.422
Evi2a
Protein EVI2A.
      
 0.422
Evi2b
Ecotropic viral integration site 2B protein.
      
 0.422
ENSCCNP00000015419
annotation not available
      
 0.410
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.