STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N4bp1NEDD4-binding protein 1 isoform X1. (670 aa)    
Predicted Functional Partners:
Ikbkg
Inhibitor of kappaB kinase gamma.
    
  0.679
Casp8
Caspase 8.
   
 
 0.664
Nedd8
Ubiquitin-like protein Nedd8.
    
 
 0.609
Slc35a2
Solute carrier family 35 (UDP-sugar transporter), member A1/2/3.
      
 0.575
Zc3h12a
Endoribonuclease ZC3H12A isoform X1.
 
    
 0.569
Arhgdia
Rho GDP-dissociation inhibitor 1.
      
 0.558
Itch
E3 ubiquitin-protein ligase Itchy homolog.
   
 
 0.550
Sox17
Transcription factor SOX17 (SOX group F).
      
 0.521
Rnf19b
E3 ubiquitin-protein ligase RNF19B isoform X1.
   
  
 0.513
Rab11fip1
LOW QUALITY PROTEIN: rab11 family-interacting protein 1.
      
 0.472
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.