STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Itga7LOW QUALITY PROTEIN: integrin alpha-7. (1143 aa)    
Predicted Functional Partners:
Itgb1
Integrin beta-1 isoform X1.
   
 0.980
Lama4
Laminin subunit alpha-4.
   
 0.969
Lama3
Laminin subunit alpha-3.
   
 0.964
Lama2
LOW QUALITY PROTEIN: laminin subunit alpha-2.
   
 0.960
Lamb1
Laminin subunit beta-1.
    
 0.960
Lamc3
Laminin subunit gamma-3.
   
 0.948
Lamc1
Laminin subunit gamma-1.
   
 0.943
Lamc2
Laminin subunit gamma-2.
   
 0.941
Lamb2
Laminin subunit beta-2.
    
 0.932
Pxn
Paxillin isoform X1.
    
 0.932
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.