STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubxn2aUBX domain-containing protein 2A. (81 aa)    
Predicted Functional Partners:
Vcp
Transitional endoplasmic reticulum ATPase isoform X1.
   
 0.996
Nsfl1c
UBX domain-containing protein 1.
    
  0.993
Ubxn6
UBX domain-containing protein 6.
    
 0.974
Ubxn10
UBX domain-containing protein 10.
    
 
 0.972
Ubxn8
UBX domain-containing protein 8 isoform X1.
    
 0.969
Aspscr1
Alveolar soft part sarcoma chromosome region, candidate 1 (human).
    
 
 0.958
Ubxn1
UBX domain-containing protein 1 isoform X1.
   
 0.953
Ubxn7
UBX domain-containing protein 7.
    
 
 0.942
Vcpip1
Deubiquitinating protein VCIP135.
   
 
 0.936
Ubxn4
UBX domain-containing protein 1/4.
    
 0.936
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.