STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cntd1Cyclin N-terminal domain-containing protein 1 isoform X1. (333 aa)    
Predicted Functional Partners:
Rnf212
Probable E3 SUMO-protein ligase RNF212.
   
 
 0.663
Msh4
DNA mismatch repair protein MSH4.
   
 
 0.612
Junb
Transcription factor jun-B.
    
 
 0.604
Jun
Transcription factor AP-1.
    
 
 0.604
Rfc3
Replication factor C subunit 3/5.
      
 0.558
Mad2l2
Mitotic spindle assembly checkpoint protein MAD2B.
      
 0.554
Sycp3
Synaptonemal complex protein 3.
    
 
 0.554
Cdc34
Ubiquitin-conjugating enzyme E2 R1 isoform X1.
      
 0.553
Wnk4
Serine/threonine-protein kinase WNK4 isoform X1.
 
      0.553
Med7
Mediator of RNA polymerase II transcription subunit 7.
    
 
 0.550
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.