STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srgap1SLIT-ROBO Rho GTPase activating protein 1. (1036 aa)    
Predicted Functional Partners:
Robo1
Roundabout guidance receptor 1.
    
 0.761
ENSCCNP00000010977
annotation not available
   
 0.744
ENSCCNP00000019524
Intersectin-2-like isoform X1.
   
 0.744
Itsn2
Intersectin 2.
   
0.744
ENSCCNP00000032846
Intersectin-1-like.
   
 0.620
ENSCCNP00000032862
Intersectin-1-like.
   
 0.620
ENSCCNP00000032889
Intersectin-1 isoform X1.
   
 0.620
Slit3
Slit homolog 3 protein.
     
 0.589
Cdc42
Cell division control protein 42 homolog.
   
 0.578
ENSCCNP00000013654
annotation not available
   
 0.578
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.