STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Txndc11Thioredoxin domain-containing protein 11 isoform X1. (950 aa)    
Predicted Functional Partners:
Edem2
ER degradation-enhancing alpha-mannosidase-like protein 2.
   
 
 0.824
Hspa5
Endoplasmic reticulum chaperone BiP.
   
 0.746
Ankrd45
Ankyrin repeat domain-containing protein 45.
   
 0.746
Edem3
ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X1.
    
 
 0.703
ENSCCNP00000030688
Selenocysteine-specific elongation factor-like isoform X1.
    
 0.642
Ero1a
ERO1-like protein alpha.
   
 0.627
Ero1lb
ERO1-like protein beta isoform X1.
   
 0.627
ENSCCNP00000013058
annotation not available
   
 0.620
Calr3
Calreticulin-3 isoform X1.
   
 0.620
Calr
Calreticulin.
   
 0.620
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.