STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrcol1Leucine rich colipase-like 1. (155 aa)    
Predicted Functional Partners:
Nyap1
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1 isoform X1.
      
 0.582
Nab2
NGFI-A-binding protein 2.
      
 0.525
4921507P07Rik
Uncharacterized protein C7orf31 homolog.
      
 0.476
Ttc26
Intraflagellar transport protein 56 isoform X1.
      
 0.454
Fam229b
Protein FAM229B.
      
 0.402
Znrf4
Zinc and ring finger 4.
      
 0.400
Rnf13
Ring finger protein 13.
      
 0.400
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.