STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000028511Predicted gene 266. (200 aa)    
Predicted Functional Partners:
ENSCCNP00000010977
annotation not available
   
 0.768
ENSCCNP00000019524
Intersectin-2-like isoform X1.
   
 0.768
Itsn2
Intersectin 2.
   
 0.768
Rapgef4
Rap guanine nucleotide exchange factor 4 isoform X1.
    
 0.654
ENSCCNP00000032846
Intersectin-1-like.
    
 0.651
ENSCCNP00000032862
Intersectin-1-like.
    
 0.651
ENSCCNP00000032889
Intersectin-1 isoform X1.
    
 0.651
Rap1gap
Rap1 GTPase-activating protein 1 isoform X1.
    
 0.611
Nf1
Neurofibromin 1.
   
 0.568
Met
Hepatocyte growth factor receptor isoform X1.
   
 0.563
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.