STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Upk3aUroplakin-3a isoform X1. (286 aa)    
Predicted Functional Partners:
Upk1b
Uroplakin-1b.
   
 
 0.769
Upk1a
Uroplakin-1a.
   
 
 0.749
Upk2
Uroplakin-2 isoform X1.
   
  
 0.748
Ggt5
Gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase.
      
 0.487
Gcsam
Germinal center-associated signaling and motility protein.
      
 0.485
Zfp512b
LOW QUALITY PROTEIN: zinc finger protein 512B.
      
 0.414
Zfand3
Zinc finger, AN1-type domain 3.
      
 0.408
Fgd6
FYVE, RhoGEF and PH domain-containing protein 6.
      
 0.405
Lrg1
Leucine-rich alpha-2-glycoprotein.
      
 0.404
ENSCCNP00000001976
Tescalcin.
      
 0.403
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.