STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000028793annotation not available (81 aa)    
Predicted Functional Partners:
Puf60
Poly(U)-binding-splicing factor PUF60 isoform X1.
   
 
 0.649
Qk
Protein quaking isoform X1.
   
 
 0.525
ENSCCNP00000007033
KH domain-containing, RNA-binding, signal transduction-associated protein 2.
   
 
 0.509
Khdrbs1
KH domain-containing, RNA-binding, signal transduction-associated protein 1.
   
 
 0.506
Khdrbs3
KH domain-containing, RNA-binding, signal transduction-associated protein 3.
   
 
 0.484
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.468
ENSCCNP00000013297
annotation not available
   
 0.433
ENSCCNP00000013534
Poly(A)-specific ribonuclease PARN-like.
   
 0.433
Khdc4
UPF0469 protein KIAA0907 homolog isoform X1.
      
 0.405
Exosc2
Exosome complex component RRP4.
   
  0.400
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.