STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000029153annotation not available (92 aa)    
Predicted Functional Partners:
ENSCCNP00000017930
Nucleoside diphosphate kinase B.
   
 
0.901
Mrps12
28S ribosomal protein S12, mitochondrial.
   
 0.807
Mrps16
LOW QUALITY PROTEIN: 28S ribosomal protein S16, mitochondrial.
  
 0.801
ENSCCNP00000029596
annotation not available
  
 
0.798
ENSCCNP00000017924
Nucleoside diphosphate kinase A-like.
  
 
0.795
ENSCCNP00000013906
annotation not available
   
 
0.789
Mrps10
28S ribosomal protein S10, mitochondrial.
   
 0.788
Mrps15
28S ribosomal protein S15, mitochondrial isoform X1.
  
 0.787
Mrps7
28S ribosomal protein S7, mitochondrial.
   
 0.783
Mrps6
28S ribosomal protein S6, mitochondrial.
   
  0.782
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.