STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hdac4LOW QUALITY PROTEIN: histone deacetylase 4-like. (1070 aa)    
Predicted Functional Partners:
ENSCCNP00000000453
LOW QUALITY PROTEIN: nuclear receptor corepressor 2-like.
   
 0.962
Hdac5
Histone deacetylase 5 isoform X1.
  
 
0.954
Ankra2
Ankyrin repeat family A protein 2 isoform X1.
    
 0.922
Camk4
Calcium/calmodulin-dependent protein kinase type IV.
   
 0.920
ENSCCNP00000019143
Myocyte enhancer factor 2C.
   
 
 0.867
Ywhag
14-3-3 protein gamma/eta.
   
 
 0.847
Rfxank
Regulatory factor X-associated ankyrin-containing protein.
   
 0.833
Arid4b
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.815
Arid4a
AT-rich interactive domain-containing protein 4A isoform X1.
    
 0.815
Sin3a
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
   
 0.813
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.