STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000029359annotation not available (74 aa)    
Predicted Functional Partners:
Katna1
Katanin p60 ATPase-containing subunit A1.
   
 
 0.618
ENSCCNP00000005380
Katanin p60 ATPase-containing subunit A-like 2.
   
 
 0.506
ENSCCNP00000000853
LOW QUALITY PROTEIN: katanin p60 ATPase-containing subunit A-like 1.
   
 
 0.477
Katnb1
Katanin p80 WD40 repeat-containing subunit B1 isoform X1.
    
 
 0.473
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.