STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc189Coiled-coil domain-containing protein 189. (328 aa)    
Predicted Functional Partners:
ENSCCNP00000013845
annotation not available
    
 
 0.804
ENSCCNP00000006495
annotation not available
    
 
 0.650
Dpy30
Protein dpy-30 homolog.
    
 
 0.650
ENSCCNP00000014438
annotation not available
    
 
 0.633
Armc3
Armadillo repeat-containing protein 3.
      
 0.589
Tmem95
Transmembrane protein 95.
      
 0.577
Tmed6
Transmembrane emp24 domain-containing protein 6.
      
 0.527
Cfap221
LOW QUALITY PROTEIN: cilia- and flagella-associated protein 221.
    
 
 0.516
Polr3c
DNA-directed RNA polymerase III subunit RPC3.
    
   0.504
ENSCCNP00000003010
annotation not available
    
 
 0.463
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.