STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aspg60 kDa lysophospholipase. (562 aa)    
Predicted Functional Partners:
Asrgl1
L-asparaginase / beta-aspartyl-peptidase.
   
  
 0.589
Rpl5
60S ribosomal protein L5 isoform X1.
    
 
 0.586
ENSCCNP00000027249
Threonine aspartase 1 isoform X1.
   
  
 0.545
Stt3b
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B isoform X1.
 
  
  0.520
Cfap52
Cilia- and flagella-associated protein 52.
 
  
  0.493
Ift81
Intraflagellar transport protein 81 homolog isoform X1.
    
 0.452
Psmb5
Proteasome subunit beta type-5.
    
 0.445
Ift88
LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog.
   
 0.429
Kif26a
Kinesin-like protein KIF26A isoform X1.
 
  
 0.425
Stt3a
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A.
 
  
  0.415
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.