STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000029713annotation not available (429 aa)    
Predicted Functional Partners:
Commd6
COMM domain-containing protein 6 isoform X1.
     
 0.732
Emd
Emerin.
    
 
 0.731
Fbxo47
F-box only protein 47.
      
 0.567
Nedd8
Ubiquitin-like protein Nedd8.
   
 
 0.538
Uba3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
   
 
 0.528
Nae1
Amyloid beta precursor protein binding protein 1.
   
 
  0.524
ENSCCNP00000027691
COMM domain containing 8.
    
  0.511
Commd5
COMM domain-containing protein 5.
   
 
  0.508
Il4i1
L-amino-acid oxidase.
   
  
 0.463
Cul1
Cullin 1.
     
 0.450
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.