STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tox3TOX high mobility group box family member 3 isoform X1. (568 aa)    
Predicted Functional Partners:
Dennd1a
LOW QUALITY PROTEIN: DENN domain-containing protein 1A.
      
 0.564
Lsp1
Lymphocyte-specific protein 1 isoform X1.
      
 0.560
Actr8
Actin-related protein 8 isoform X1.
    
 0.549
Btbd9
BTB/POZ domain-containing protein 9 isoform X1.
      
 0.544
Actr5
LOW QUALITY PROTEIN: actin-related protein 5.
    
 0.532
Gtf2h1
Transcription initiation factor TFIIH subunit 1.
    
 0.524
Krr1
KRR1 small subunit processome component homolog isoform X1.
   
 
 0.524
Ercc3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.515
Gtf2h3
General transcription factor IIH subunit 3 isoform X1.
    
 0.510
Polrmt
LOW QUALITY PROTEIN: DNA-directed RNA polymerase, mitochondrial.
    
 0.502
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.