STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dscr3Down syndrome critical region protein 3 isoform X1. (297 aa)    
Predicted Functional Partners:
Vps29
Vacuolar protein sorting-associated protein 29 isoform X1.
   
 
 0.882
Ccdc22
Coiled-coil domain containing 22.
   
 
 0.839
Ccdc93
Coiled-coil domain-containing protein 93.
    
 
 0.811
ENSCCNP00000023608
annotation not available
   
 
 0.806
Commd4
COMM domain containing 4.
    
 
 0.772
Commd2
COMM domain-containing protein 2.
    
 
 0.760
Commd6
COMM domain-containing protein 6 isoform X1.
    
 
 0.757
Commd3
COMM domain-containing protein 3 isoform X1.
    
 
 0.751
Commd1
COMM domain-containing protein 1 isoform X1.
    
 
 0.747
Fam45a
Protein FAM45A.
    
 
 0.706
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.