STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccl16C-C motif chemokine 16 isoform X1. (137 aa)    
Predicted Functional Partners:
ENSCCNP00000020835
C-C chemokine receptor type 1-like.
    
 0.983
Ccl5
C-C motif chemokine 5.
    
0.957
Ccr8
C-C chemokine receptor type 8.
    
 0.884
Cxcr5
C-X-C chemokine receptor type 5.
    
 0.864
Ccr4
C-C chemokine receptor type 4.
    
 0.861
Ccr2
C-C chemokine receptor type 2.
    
 0.850
Cx3cr1
CX3C chemokine receptor 1.
    
 0.815
Ccr10
LOW QUALITY PROTEIN: C-C chemokine receptor type 10.
   
 0.813
Cxcr6
C-X-C chemokine receptor type 6.
    
 0.806
Ccr3
C-C chemokine receptor type 3.
    
 0.806
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.