STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dmxl1DmX-like protein 1 isoform X1. (3062 aa)    
Predicted Functional Partners:
Rogdi
Protein rogdi homolog isoform X1.
    
 
 0.874
Bdp1
Transcription factor TFIIIB component B'' homolog isoform X1.
   
    0.619
Atp6v1b1
ATPase, H+ transporting, lysosomal V1 subunit B1.
    
 
 0.601
ENSCCNP00000018338
annotation not available
    
 
 0.601
Atp6v1b2
V-type proton ATPase subunit B, brain isoform.
    
 
 0.601
Atp6v1e2
ATPase, H+ transporting, lysosomal V1 subunit E2.
    
 
 0.598
Atp6v1e1
V-type H+-transporting ATPase subunit E.
    
 
 0.598
Nktr
Natural killer tumor recognition sequence.
   
 
 0.596
Wdr72
WD repeat-containing protein 72.
   
 
 0.588
Atp6v1a
V-type proton ATPase catalytic subunit A.
    
 
 0.573
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.