STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000030211Ubiquinol-cytochrome c reductase subunit 8. (82 aa)    
Predicted Functional Partners:
ENSCCNP00000002486
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.999
Cox5a
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.999
ENSCCNP00000009227
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.999
Uqcr10
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.999
ENSCCNP00000022513
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.999
Uqcrc1
Cytochrome b-c1 complex subunit 1, mitochondrial.
   
 0.999
Uqcrc2
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 0.999
ENSCCNP00000029239
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.999
ENSCCNP00000014569
Ubiquinol-cytochrome c reductase subunit 10.
   
 0.998
ENSCCNP00000019005
Cytochrome b-c1 complex subunit 6, mitochondrial.
   
 0.998
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.