STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arid1bAT-rich interactive domain-containing protein 1B isoform X1. (1592 aa)    
Predicted Functional Partners:
Arid1a
LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A.
   
0.989
Smarcb1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.988
Smarca4
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
   
 0.987
Smarce1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like.
    
 0.984
Smarcc2
SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C.
   
 0.977
Smarcd1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
    
 0.973
Dpf3
BRG1-associated factor 45B/C.
    
 0.965
Actl6a
Actin-like protein 6A isoform X1.
    
 0.951
Dpf1
Zinc finger protein neuro-d4 isoform X1.
    
 0.947
Actl6b
Actin-like protein 6B.
    
 0.941
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.