STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nr1h2LOW QUALITY PROTEIN: oxysterols receptor LXR-beta. (455 aa)    
Predicted Functional Partners:
Rxra
Retinoic acid receptor RXR-alpha isoform X1.
   
0.951
Rxrb
Retinoic acid receptor RXR-beta isoform X1.
   
0.941
Nr1h3
Oxysterols receptor LXR-alpha isoform X1.
  
  
0.934
Ogt
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1.
    
  0.904
ENSCCNP00000021451
Nuclear receptor coactivator 2-like.
    
 0.879
ENSCCNP00000021453
annotation not available
    
 0.879
Rxrg
Retinoic acid receptor RXR-gamma isoform X1.
   
0.877
Ncoa1
Nuclear receptor coactivator 1 isoform X1.
    
 0.869
Abca1
ATP-binding cassette, subfamily A (ABC1), member 1.
    
 0.835
Nr1d2
Nuclear receptor subfamily 1 group D member 2 isoform X1.
   
0.755
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.