STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3glctUDP-glucose:O-linked fucose beta-1,3-glucosyltransferase. (458 aa)    
Predicted Functional Partners:
Spon1
Spondin-1.
     
 0.701
Pofut2
GDP-fucose protein O-fucosyltransferase 2.
      
 0.682
Isy1
Pre-mRNA-splicing factor ISY1 homolog.
 
      0.660
ENSCCNP00000005068
annotation not available
     
 0.642
Nelfb
Negative elongation factor B.
   
 0.636
Adamtsl4
ADAMTS-like protein 4 isoform X1.
     
 0.601
Tmem53
Transmembrane protein 53.
      
 0.600
Asphd2
LOW QUALITY PROTEIN: aspartate beta-hydroxylase domain-containing protein 2.
      
 0.600
Adamts9
A disintegrin and metalloproteinase with thrombospondin motifs 9.
    
 0.584
Cfp
Complement factor properdin.
    
 0.584
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.