STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000031169Retinal dehydrogenase 1-like. (501 aa)    
Predicted Functional Partners:
Cyp1a2
Cytochrome P450 family 1 subfamily A polypeptide 2.
   
 
 0.931
Sdr16c5
All-trans-retinol dehydrogenase (NAD+).
   
 0.925
ENSCCNP00000005720
Dehydrogenase/reductase SDR family member 4-like.
   
 0.925
ENSCCNP00000004376
Cytochrome P450 family 3 subfamily A.
   
 
 0.916
ENSCCNP00000006336
Cytochrome P450 family 3 subfamily A.
   
 
 0.916
Bco1
Beta,beta-carotene 15,15'-dioxygenase.
   
 
 0.916
ENSCCNP00000003443
LOW QUALITY PROTEIN: cytochrome P450 4A10-like.
   
 
 0.915
ENSCCNP00000008934
Long-chain fatty acid omega-monooxygenase.
   
 
 0.915
Cyp1a1
Cytochrome P450 family 1 subfamily A polypeptide 1.
   
 
 0.913
ENSCCNP00000011709
Cytochrome P450 family 2 subfamily B.
   
 
 0.911
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.