STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmprss3Transmembrane protease serine 3 isoform X1. (477 aa)    
Predicted Functional Partners:
Bop1
Ribosome biogenesis protein BOP1.
      
 0.558
Tmie
Transmembrane inner ear expressed protein.
      
 0.557
ENSCCNP00000019619
annotation not available
 
 
  
 0.526
Met
Hepatocyte growth factor receptor isoform X1.
    
 0.515
Mst1r
Macrophage-stimulating protein receptor.
    
 0.515
Ubash3a
Ubiquitin-associated and SH3 domain-containing protein A isoform X1.
   
  
 0.515
Pjvk
Pejvakin.
     
 0.502
Tmc1
Transmembrane channel-like protein 1.
    
 0.498
Ctrb1
Chymotrypsinogen B2 isoform X1.
  
0.431
ENSCCNP00000019797
annotation not available
    
 0.417
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.