STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rtn4ip1Reticulon-4-interacting protein 1, mitochondrial isoform X1. (396 aa)    
Predicted Functional Partners:
ENSCCNP00000031305
LOW QUALITY PROTEIN: reticulon-4-like.
    
 
 0.704
Mecr
Mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase.
  
  
 0.612
Fasn
Fatty acid synthase, animal type.
  
 0.587
ENSCCNP00000031469
LOW QUALITY PROTEIN: cytochrome c-type heme lyase.
   
  
 0.581
Acadm
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 0.564
ENSCCNP00000016497
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.558
ENSCCNP00000016506
LOW QUALITY PROTEIN: hydroxysteroid dehydrogenase-like protein 2.
  
 0.558
ENSCCNP00000024019
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.558
Qrsl1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial isoform X1.
   
  
 0.532
Ppp1r21
Protein phosphatase 1 regulatory subunit 21 isoform X1.
    
   0.523
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.