STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000032071annotation not available (105 aa)    
Predicted Functional Partners:
Mat2b
Methionine adenosyltransferase 2 subunit beta.
   
 0.885
ENSCCNP00000018333
annotation not available
   
 0.885
Mthfr
Methylenetetrahydrofolate reductase isoform X1.
  
 
 0.832
Gart
Trifunctional purine biosynthetic protein adenosine-3.
  
  
 0.776
ENSCCNP00000022915
Spermine synthase-like.
  
 
 0.696
Srm
Spermidine synthase.
  
 
 0.696
Agxt
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
 0.687
Yars
Tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.667
Shmt2
LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial.
  
 
 0.626
Shmt1
Serine hydroxymethyltransferase, cytosolic.
  
 
 0.626
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.