STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CcnjCyclin-J isoform X1. (383 aa)    
Predicted Functional Partners:
Cdc6
Cell division control protein 6 homolog isoform X1.
   
 0.790
Skp2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
   
 0.743
Cdt1
Chromatin licensing and DNA replication factor 1.
   
 0.740
Cdc20
Cell division cycle 20, cofactor of APC complex.
   
 0.690
Fzr1
Cell division cycle 20-like protein 1, cofactor of APC complex.
   
 0.690
Intu
Protein inturned.
   
 0.690
Anapc1
Anaphase-promoting complex subunit 1 isoform X1.
    
 0.682
ENSCCNP00000013037
annotation not available
   
 0.673
Cks1b
Cyclin-dependent kinases regulatory subunit 1 isoform X1.
   
 0.673
ENSCCNP00000031727
Cyclin-dependent kinase regulatory subunit CKS1.
   
 0.673
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.