STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000032429annotation not available (56 aa)    
Predicted Functional Partners:
ENSCCNP00000032423
Serine/threonine-protein kinase DCLK1-like.
    
 
 0.867
Tuba4a
Tubulin alpha-4A chain.
   
 
 0.664
ENSCCNP00000009603
annotation not available
   
 
 0.664
Tubal3
Tubulin alpha chain-like 3.
   
 
 0.664
ENSCCNP00000023681
annotation not available
   
 
 0.664
ENSCCNP00000026677
annotation not available
   
 
 0.664
ENSCCNP00000026711
Tubulin alpha-3 chain.
   
 
 0.664
Tuba8
Tubulin alpha-8 chain isoform X1.
   
 
 0.664
ENSCCNP00000033278
Tubulin alpha-1B chain-like.
   
 
 0.664
Tuba1a
Tubulin alpha-1A chain.
   
 
 0.664
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.