STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sephs1Selenide, water dikinase 1. (392 aa)    
Predicted Functional Partners:
Sepsecs
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase.
     
 0.955
Scly
Selenocysteine lyase isoform X1.
    
 0.949
Txnrd2
Thioredoxin reductase 2, mitochondrial isoform X1.
  
 
 0.921
Txnrd3
Thioredoxin reductase (NADPH).
  
 
 0.911
Txnrd1
Thioredoxin reductase 1, cytoplasmic isoform X1.
  
 
 0.911
ENSCCNP00000014061
Selenide, water dikinase 2-like.
  
 
 
0.904
Sephs2
Selenide, water dikinase 2.
  
 
 
0.904
ENSCCNP00000004466
annotation not available
    
 0.546
Nfs1
Cysteine desulfurase, mitochondrial isoform X1.
    
 0.473
ENSCCNP00000021746
annotation not available
 
      0.449
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.