STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl4639S ribosomal protein L46, mitochondrial. (287 aa)    
Predicted Functional Partners:
Mrpl27
39S ribosomal protein L27, mitochondrial.
   
 
 0.994
Mrpl16
39S ribosomal protein L16, mitochondrial.
   
 0.994
Mrpl40
39S ribosomal protein L40, mitochondrial.
   
 
 0.994
Mrps11
28S ribosomal protein S11, mitochondrial isoform X1.
   
 
 0.994
Mrps15
28S ribosomal protein S15, mitochondrial isoform X1.
   
 
 0.993
Mrpl21
39S ribosomal protein L21, mitochondrial isoform X1.
   
 
 0.993
Mrpl22
Mitochondrial ribosomal protein L22.
   
   0.992
Mrpl43
39S ribosomal protein L43, mitochondrial.
   
 
 0.991
Mrps7
28S ribosomal protein S7, mitochondrial.
   
 
 0.991
Mrpl44
39S ribosomal protein L44, mitochondrial.
   
 
 0.990
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.