STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PsapProsaposin isoform X1. (542 aa)    
Predicted Functional Partners:
Psapl1
Proactivator polypeptide-like 1.
  
  
 
0.902
Galc
Galactocerebrosidase isoform X1.
    
 
 0.816
Gpr37
Prosaposin receptor GPR37.
     
 0.802
ENSCCNP00000019198
Glucosidase, beta, acid.
   
 0.792
Gpr37l1
Prosaposin receptor GPR37L1.
     
 0.789
Sftpc
Pulmonary surfactant-associated protein C isoform X1.
   
 
 0.675
Ctsd
Cathepsin D isoform X1.
   
 0.617
Tmem130
Transmembrane protein 130 isoform X1.
   
 0.596
Chid1
Chitinase domain-containing protein 1.
     
 0.585
Lamp1
Lysosome-associated membrane glycoprotein 1.
   
  
 0.577
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.