STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DonsonProtein downstream neighbor of Son isoform X1. (560 aa)    
Predicted Functional Partners:
Orc1
Origin recognition complex subunit 1.
   
  
 0.809
Gart
Trifunctional purine biosynthetic protein adenosine-3.
   
  
 0.797
Mcm2
DNA replication licensing factor MCM2.
   
   0.726
Prim2
DNA primase large subunit isoform X1.
   
  
 0.686
Mrps6
28S ribosomal protein S6, mitochondrial.
      
 0.652
Cryzl1
Crystallin, zeta (quinone reductase)-like 1.
 
    
 0.650
Pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
   
  
 0.632
Rfc4
Replication factor C subunit 2/4.
   
  
 0.606
Chaf1b
LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit B.
   
  
 0.593
Son
Protein SON isoform X1.
      
 0.588
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.