STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taf6lTranscription initiation factor TFIID subunit 6. (628 aa)    
Predicted Functional Partners:
Taf10
Transcription initiation factor TFIID subunit 10.
    
 0.975
Taf12
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.964
Taf9b
Transcription initiation factor TFIID subunit 9B.
   
 0.963
Taf5l
Transcription initiation factor TFIID subunit 5.
   
 0.959
Taf8
Transcription initiation factor TFIID subunit 8 isoform X1.
    
 0.957
Taf13
Transcription initiation factor TFIID subunit 13.
    
 0.957
Taf7
Transcription initiation factor TFIID subunit 7.
    
 0.957
Taf11
Transcription initiation factor TFIID subunit 11 isoform X1.
    
 0.957
Taf1
TATA-box binding protein associated factor 1.
    
 0.954
Supt3h
Transcription initiation protein SPT3 homolog isoform X1.
    
 0.951
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.