STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dcaf11DDB1- and CUL4-associated factor 11 isoform X1. (546 aa)    
Predicted Functional Partners:
Ddb1
DNA damage-binding protein 1.
    
 0.971
Cul4a
Cullin-4A isoform X1.
    
 0.935
Cul4b
Cullin-4B isoform X1.
    
 0.905
Cops6
COP9 signalosome complex subunit 6.
    
 0.764
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.761
Cops2
COP9 signalosome complex subunit 2 isoform X1.
    
 0.761
Cops3
COP9 signalosome complex subunit 3 isoform X1.
    
  0.748
Rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.726
Dcaf7
DDB1- and CUL4-associated factor 7.
    
 0.707
Dda1
DET1- and DDB1-associated protein 1.
    
 0.705
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.