STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NsfVesicle-fusing ATPase isoform X1. (653 aa)    
Predicted Functional Partners:
Napa
Alpha-soluble NSF attachment protein.
   
 0.974
Scfd1
Sec1 family domain-containing protein 1 isoform X1.
   
 0.967
Napb
Beta-soluble NSF attachment protein isoform X1.
   
 0.957
Ubxn7
UBX domain-containing protein 7.
   
 0.952
Napg
Gamma-soluble NSF attachment protein.
   
 0.938
Ykt6
Synaptobrevin homolog YKT6.
   
 0.930
Stx5
Syntaxin 5.
    
 0.918
Vti1a
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
   
 0.910
Gabra1
Gamma-aminobutyric acid receptor subunit alpha-1.
   
 0.907
Snap25
Synaptosomal-associated protein 25 isoform X1.
   
 
 0.905
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.