STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4C9B5_BRARPUncharacterized protein; Belongs to the peptidase A1 family. (495 aa)    
Predicted Functional Partners:
M4D9G9_BRARP
Uncharacterized protein.
   
  
 0.563
M4ETZ0_BRARP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.469
M4CM17_BRARP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.457
M4E4K0_BRARP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.457
M4F781_BRARP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.457
M4CGN0_BRARP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.456
M4E832_BRARP
CRAL-TRIO domain-containing protein.
      
 0.456
M4CXW2_BRARP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.439
M4EJB5_BRARP
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.438
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.