STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4C9J7_BRARPUncharacterized protein; Belongs to the GST superfamily. (213 aa)    
Predicted Functional Partners:
M4EVA2_BRARP
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.924
M4FI82_BRARP
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.924
M4FAI8_BRARP
Thioredoxin domain-containing protein.
   
 0.705
M4CUC5_BRARP
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.686
GR1-2
Glutathione reductase; Maintains high levels of reduced glutathione.
     
 0.685
M4CS95_BRARP
Glutathione reductase; Maintains high levels of reduced glutathione.
     
 0.685
M4DE82_BRARP
Glutathione reductase; Maintains high levels of reduced glutathione.
     
 0.685
GR1
Glutathione reductase, cytosolic; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.685
M4D0G9_BRARP
Glutathione synthetase.
     
 0.678
M4D2H2_BRARP
Uncharacterized protein.
     
 0.673
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.