STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M4CB93_BRARPUncharacterized protein. (126 aa)    
Predicted Functional Partners:
M4EHC4_BRARP
Uncharacterized protein.
  
     0.534
M4CJC9_BRARP
Uncharacterized protein.
  
     0.514
M4EB22_BRARP
Uncharacterized protein.
  
   
 0.513
M4DHX9_BRARP
PORR domain-containing protein.
  
     0.511
M4DHS5_BRARP
Uncharacterized protein.
  
     0.503
M4F8V1_BRARP
PORR domain-containing protein.
  
     0.503
M4CUZ1_BRARP
Uncharacterized protein.
  
     0.497
M4DND5_BRARP
HMA domain-containing protein.
  
     0.494
M4EH35_BRARP
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.494
M4FCJ0_BRARP
Neprosin_AP domain-containing protein.
  
     0.487
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 51351
Other names: B. rapa subsp. pekinensis, Brassica campestris (Pekinensis Group), Brassica campestris subsp. pekinensis, Brassica campestris subsp. pekinensis (Lour.) G.Olsson, Brassica campestris var. pekinensis, Brassica pekinensis, Brassica rapa Chinese Cabbage Group, Brassica rapa subsp. pekinensis, Brassica rapa subsp. pekinensis (Lour.) Hanelt ex Mansf., Brassica rapa var. glabra, Brassica rapa var. glabra Regel, Brassica rapa var. pekinensis, Chinese cabbage, bai cai, celery cabbage, pe-tsai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.